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BME 1 Winter Quarter 2025


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Cardiovascular Diseases

Each group will choose one of the following 3 cardiovascular diseases to study -

  • Ischemic cardiomyopathy
  • Arrhythmias or rhythm disorders / disease
  • Aortic aneurysm

Outline & Rubric of Report for Project 1

The report should include a total of 7 pages and follow this outline and directions for formatting on assignment sheet and you will want to address the following topics:

  • incidence & impact statistics
  • relevant biological & anatomical features related to normal & diseased states
  • how is your condition detected and diagnosed
  • how is the disease treated
  • identify one critical need going forward for EITHER diagnosis OR treatment for a total of just ONE identification; plus the proposed solution

The outline of the paper should be for a total of 80 points:

  1. Title Page - 2.5 pts:  title, course #, Instructor, TA, group #, names/jobs/signature of group members with signatures (digital signatures OK)
  2. Abstract - 5 pts; 1 paragraph, 250 word max, summary of entire report - write last
  3. Background - 10 pts;  (Incidence rates, demographic census) & clinical assessment (medical): 1-1.5 pp
  4. Diagnosis & Symptoms - 10 pts: 1-1.5 pp
  5. Therapy & Treatment  - 10 pts: 1-1.5 pp
  6. Suggestions/Conclusions - 20 pts - include 1 critical need - only one for either diagnosis OR treatment; and 1 proposed solution for EITHER diagnosis OR treatment: .5-1 page
  7. References - 5 pts: ~1 p. - make sure that you numbered the references in the text and include numerically in sequence in your bibliography full citation (author(s), date, title of article, source, volume #, issue, pages,  PMID #
  8. Contributions - 2.5 pts:  - clearly outline the specific roles and tasks each person undertook to ensure transparency & fairness
  9. Figures - 10 pts:   should be embedded in the text, not included as a separate appendix.  Ensure that each figure is numbered and includes a caption beneath it, specifying its content and applicable, citing the source of the original figure.Also ensure that each figure is numbered and includes a caption at the bottom. reasonable limit (2-4 figures)
  10. Final 5 points will be awarded for formatting, appearance and smoothly connecting each section - potentially use an outline system

Formatting - Report has a strict limit of 7 pages, subject to the following formatting rules: double-spaced, one-sided, 1-inch margins, and 11 pt. Arial or similar font.  This 7-pp limit DOES NOT include the Title Page, References or Contributions which are embedded in the text.  Any pages beyond the limit will not be considered in the evaluation.  It is challenging to synthesize the information into such a short document, so focus on major factors and present them succinctly.  There is no space for extra information.

Should correspond to following roles of each group member or some variation of this:

  1. leader/convener - abstract/conclusions/future focus
  2. editor - common voice - diagnostics/symptoms; references
  3. journal researcher - background/demographic census
  4. curator - synthesizes research process by highlighting therapy, treatment, interventions
  5. art director - looks for appropriate relevant images, figures; makes sure that illustrations are complete & clear; works on layout of presentation & submission

Some + / - News on Cardiovascular Diseases

All are from Factiva Database - conduct a search indicating how far back you want to search - default is most recent 3 months;  recommend that you use Chrome browser.  

Sample References

The following are mostly made up examples and should be listed in number order based on appearance in paper. 

Journal reference in a reference list

Rosenvinge, J.-H., Skårderud, F., et al. Can educational programmes raise clinical competence in treating eating disorders?  Results from a Norwegian trial. European Eating Disorders Review, 11, 329-343 (2003).  PMID 21376230.

NOTE: PMCIDs are unique identifiers equivalent to DOIs, but different than a PMID

Journal reference in text

Example 1

(Rosenvinge, Skårderud & Thune-Larsen, 2003) for the first time the reference is cited. Afterwards, use (Rosenvinge et al., 2003). If citing the same article in the same paragraph, use only Rosenvinge et al without the year. 

Book chapter in a reference list

Vugt, M. van, & Park, J. H. . The tribal instinct hypothesis: Evolution and the social psychology of intergroup relations. In S. Stürmer & M. Snyder (Eds.), The psychology of prosocial behavior: Group processes, intergroup relations, and helping . Malden, MA: Wiley-Blackwell. 2017: 6-20.

For Images, Artwork, Photographs:

  • Basic format for artwork from a museum or other website:  Artist Last Name, First Initial. Second Initial.  (Year). Title of artwork [Format]. Location. URL
  • Basic Format for Stock Image or Clip Art: No reference entry needed for clips of art from Microsoft or or PowerPoint programs.  Otherwise: Author. (Year). Title of image [format. Website. URL
  • Image with no Author, title or Date:  You still need to cite the image even if you are missing much of the information - try to find images that do provide this information.  Example.  [Photograph of breast cancer patient]. (n.d.). https://cdc/gov
  • Photograph from a website: if not title is noted, add a description in brackets.  Photographer's Surname, 1st Initial. (date). [Photograph or format]. Source website.
  • Google Images: Go to original website of the image and cite in one of the earlier mentioned formats.

Report in a reference list - Technical and research reports

Sahoo, A.   Probiotics and prebiotics in clinical nutrition: The regulatory landscape, unmet need and disease applications, future growth and key players. April 2011.  (Reference Code: BI00044-004). Retrieved from Business Insights http://360.datamonitor.com/Product?pid=BI00044-004.

A website:  National Cancer Institute (www.cancer.gov) or Susan G.Koman for the Cure (ww5.koman.org)

 

 

Citing References

Citing Reference Sources

Bibliography should include:

 

  • List in number order (based on appearance)
  • Journal article - Author (Last, FI. (Date). Title of Article. Journal Title, Volume #,(Issue #), Pages . PMID # - examples follow:
    • Hanahan, D. & Weinberg, R.A. The hallmarks of cancer. Cell 144, 646-74 (2011). PMID 21376230
    • Paszek, M.J., Zahir, N., et al. Tensional Homeostasis and the Malignant Phenotype. Cancer Cell 8(3), 241-54 (2005). PMID 16169468
  • Statistical source or data - for example
    • Lung Cancer Facts 2022 (https://www.lungcancerresearchfoundation.org/lung-cancer-facts/)
    • Siegel RL, Miller KD, Fuchs HE, Jemal A.(2022)  Cancer statistics, 2022. CA Cancer J Clin. 72(1): 733.
    • Cancer Facts and Figures 2022. https://www.cancer.org/research/cancer-facts-statistics.html
  • Website: Name and URL
    • National Cancer Institute (www.cancer.gov)
    • Susan G.Kamon for the Cure (www..koman.org)

Regarding Annotations:  You are asked to provide annotations for each cited article - they should include:  A few short sentences that indicate the value of the article for the reason that you searched it - for instance, "Provides current explanation and details about how immunotherapy is a successful treatment of this kind of cancer and what kind of experience patients have with this." OR "Patients often are diagnosed with a more advanced stage of ___cancer because of their being asymptomatic for a long while and this article provides case studies about how this ____procedure or test can detect earlier signs of the cancer."

 

Project 1 - Cardiovascular Disease Report

Following are hints for the project:

  1. Read the assignment carefully - 3 parts - -1) each group will have 5 members &  will select the cardiovascular disease they will study; attend one of the group Zoom meetings with librarian scheduled over next week, assign all group members' jobs, selection of cardiovascular disease and assignments due Wednesday, January 15 ; 2) the Progress Check for the annotated bibliography due Wednesday, January 22; 3) final paper is due Wednesday, January 29.
  2. Consider consulting or reading some important literature to understand the background of heart disease such a:
    1. Cardiovascular Disease (2023)
    2. The Heart Healers: The Misfits, Mavericks, and Rebels who Created the Greatest Medical Breakthrough of our Lives / James Forrester, M.D.(2015)
  3. Establish roles for each member of the group - Leader, Editor, Curator, Journal Researcher and Art Director - please realize that EACH GROUP MEMBER will be conducting research for their contribution as noted in #7 - some group members may be performing multiple roles
  4. Consider creating workspace to share on Google Drive and create outline of final report - learn more about options for UCI students at http://www.google.uci.edu/
  5. This project is divided into 3 tasks: 1) meet with group, determine assignments & responsibilities - review cardiovascular diseases; 2) conduct literature review and identify coverage to be included in the annotated bibliography - this includes: general sources from books, encyclopedias, websites, journal review articles covering last 5 years, current research articles from last 1-2 years that are "hot off the press" containing clinical, basic science or technologies ; 3) compose report with references, relevant figures and images
  6. the following topics must be addressed, so divide up the assignment as follows - sources are listed in the Resource Section:

    - incidence and impact statistics - background, population demographics, mortality, # of cases

    - relevant biological and anatomical features related to disease state - medical, physiological, anatomical, biological

    - how is this cardiovascular disease detected and diagnosed? - symptoms, diagnostics, conditions, demographics of patient, scans, etc

    - how is this disease and patient treated  - therapies & treatments, drug interventions, procedures or surgeries, technologies, rehabilitation

    - what is a critical needs going forward for EITHER diagnosis or treatment? - Select one to fully explore

  7. Librarian Meetings: - as many group members as can should attend that meeting; it is a big responsibility for your group leaders to translate or share all the details for every assignment, even if the session is recorded.  Once your group has selected the cardiovascular disease you will work on, find a time that disease session is scheduled and register  This is also a good set up for your other two assignments about how to find and use the appropriate resources.  Please try and have the entire group come from Sunday, January 12 - Tuesday, January 14 sign up at https://tinyurl.com/nheafnax   using your UCI.edu eMail address (xyz@uci.edu) with phone # in case I need to change schedule and with at least 4 hours notice.  Please keep the appointments for each hour uniform for a subject,  If you can't come at the time your group is coming, please try and join another group working on the same disease- these sessions are particularly relevant to your topic. I can also meet outside of these time slots if necessary - just contact me directly via eMail (jgelfand@uci.edu)  indicating the best times, including weekends and I will confirm - this should be for the entire group, not a single individual.   There will be separate sign up sheets for each of the three assigned projects. Please note that representatives of multiple groups working on the same cardiovascular disease can come to the same meeting.     You can find additional information about Google Apps for UCI users at http://www.google.uci.edu/ - this is a required activity - the goal is for the entire group to be present for PROJECT 1.  It is helpful if you can turn on your cameras and participate in the session with questions.  It is likely that if you have a question so do your teammates and others working on the same disease.
  8. Terminology is important - arrhythmia is used in PubMed instead of rhythm; some cardiovascular diseases effect different genders, ages, depending on family history, personal medical history, etc re about certain parts of the body,
  9. the 9 databases that index journal articles all contain peer-reviewed journal articles all focus on diagnosis and therapies when searches are conducted with proper terms and strategies - conduct literature searches for journal articles in databases, and trace references found in other reference sources - remember these hints:  - output defaults to Relevance - since you are seeking current content from the last 5 yrs or less, flip output to Most Recent and you can search the article for increasingly relevant terms with a    "CTRL F"    The databases are:
    1. PubMed - contains links often to fulltext content - otherwise use Find at UC icon; contains PMID #
    2. CINAHL Complete (nursing literature) - partially fulltext - contains PMID #
    3. Compendex - Engineering Index - links out to content; less clinical content but covers technologies
    4. Materials Science & Engineering Database - mostly fulltext - less clinical coverage; but
    5. Scopus - strong life science & some medical, & engineering coverage - high impact journals - link out to fulltext
    6. Web of Science - high impact journals but less medical coverage; links out to fulltext subscribed articles
    7. Google Scholar - make sure that your VPN is on if off-campus; make sure that you enter a strong search string to retrieve relevant content
    8. Annual Reviews - fulltext - will retrieve only REVIEW articles from sources such as the Annual Review of Medicine,  or Annual Review of Pathology, etc. 
    9. Academic Search Complete - a more general database but does contain peer review content that links out to fulltext articles when not self-contained within database - not as much clinical content
  10. recognize that peer review refers to the publication process - specialists comment upon submissions to ascertain that the research and data can be replicated, the findings are accurate and that new contributions of the literature are made - searching the PubMed & these other databases will assure that content has been peer reviewed

Research background of specific diagnostic - remember that in the clinical medical literature, heart, thoracic, cardiovascular are used sometimes for the same anatomy but oftentimes for different procedures.  Consider age factors, gender, predisposition, family health history, external & environmental factors

Develop chronology

Consider disease & history of patient attributes, legitimate & bonafide treatments

Examine technologies - find short films on MedlinePlus, YouTube; or journal content that incorporates sound, images and text in JoVE, images (on the Subject Guide under Finding Images or Medical Images)

Sources - you should examine:

  1. Background Information - Reference tools - encyclopedias (Medline Plus, Cleveland Clinic website or WebMD), handbooks that contain background information - often the medical and specifically the cardiovascular literature is released by the National Institutes of Health (NIH) which is the umbrella governmental unit over the National Cancer Institute (NCI) and the National Library of Medicine (NLM), and the Centers for Disease Control (CDC); all excellent sources of information. 
  2. Journal Articles - Review & Research articles - peer reviewed from a database such as PubMed (use the link to the UCI version below so that you get the UC eLinks), Google Scholar, or Web of Science or any of the other databases noted.. 
  3. Medical Textbooks & eBooks - ex) Netter's Cardiology  (is an eBook listed below), or search concordances such as CriticalKey, Access Medicine, or on the lists of eBooks below,  in Library Search for other books or eBooks
  4. Support group information directed for the patient and their family - from the American Heart Association, Heart Rhythm Society, Cardiomyopathy UK, John Ritter Foundation for Aortic Health or from the nation's major hospitals that specialize in cardiological, thoracic & heart procedures such as the Cleveland Clinic or Mayo Clinic - will link to current research efforts, some incidence data & related information

Citing your sources - this may be a bit complicated depending on what the source is and in what format it was that you consulted.  For journal articles, the format is:

Author(s). Title of article.  Source (Title of Publication) volume # (issue #), pages, (date). 

If you do not have all these elements and it was an online article, enter the DOI (Digital Object Identifier) which is a unique number corresponding to the article.  Do not use the URL except for a website and date in parentheses when you last visited site.

Point-of-Care Resources Used for Diagnostics & Treatments

There are many clinical Point-of-Care Resources that highlight processes and methods.  Some background information about Point-of-Care is found at:

Progress Check Assignment

Upload a single file to Canvas for your group that contains a progress check in the form of an annotated bibliography. Make sure to:

  • Organize the references you found to write your report in sections by type (1, 2, 3, or 4):
  1. general reference materials - books, book chapters, encyclopedias, websites
  2. websites focused specifically on your chosen cardiovascular disease
  3. journal reviews covering recent last 5 yrs for diagnosis/therapy information
  4. current research articles that are "hot off the press" - clinical, basic biology or technology studies - you may want to consult Factiva, a fulltext global professional news service - the default is to 90 days or 3 months, but you can increase it to 1, 5 yrs.  You may want to search using Chrome.
  • Include a brief summary of the information you will use for your report from references 3 and 4.
  • Convey your 1 critical need and 1 solution in the summaries. (These can change in the final report because of new information and insights gained between this summary and the final report.

 

 

Reference Sources for this Assignment

This assignment asks that you include at least 5 references that meet the following criteria:

  • papers published from 2019 to current date (latest 2 years for Research (2022+) & 5 yrs for Review articles (2019+))
  • articles should be from peer-reviewed sources where the studies had a significant "N"; searching for "Review Articles" can be helpful because of the many references they include
  • they contain a PMID # - obtained from the PubMed entry (if you find an article in another source enter the journal title in PubMed to obtain the PMID #
  • try and include from a variety of sources that also reflect the different components of the paper

Appropriate Medical Journals

How do you know if the journal articles that you find meet the criteria established in class?  You want to make sure the articles:

  • Are peer-reviewed
  • Reflect clinical research that has been tested on a significant population of afflicted patients
  • Are from major respected journals and not from small insignificant sources because the study size is small

Lists of highly ranked journals in cancer research include the following among many others: